dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001451_1|CGC1
Gene ID: MGYG000001451_00005
Location and strand information: 5065 - 5949 (+)
Family: 1.A.16.2.3
Protein type: TC
Protein description: putative formate transporter 1

Gene clsuter ID: MGYG000001451_1|CGC1
Gene ID: MGYG000001451_00006
Location and strand information: 5946 - 6470 (+)
Family: null
Protein type: null
Protein description: Uroporphyrinogen-III C-methyltransferase

Gene clsuter ID: MGYG000001451_1|CGC1
Gene ID: MGYG000001451_00007
Location and strand information: 6467 - 6730 (+)
Family: null
Protein type: null
Protein description: Uroporphyrinogen-III C-methyltransferase

Gene clsuter ID: MGYG000001451_1|CGC1
Gene ID: MGYG000001451_00008
Location and strand information: 6851 - 8242 (-)
Family: GH18|CBM5
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.409
Protein molecular weight: 50991.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC1
Gene ID: MGYG000001451_00009
Location and strand information: 8595 - 10226 (+)
Family: null
Protein type: null
Protein description: Formate--tetrahydrofolate ligase

Gene clsuter ID: MGYG000001451_1|CGC1
Gene ID: MGYG000001451_00010
Location and strand information: 10280 - 11470 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC1
Gene ID: MGYG000001451_00011
Location and strand information: 11579 - 15454 (-)
Family: GH10|CBM22|CBM9
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase A
Protein isoelectric point: 4.3208
Protein molecular weight: 139774.74
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001451_1|CGC1
Gene ID: MGYG000001451_00012
Location and strand information: 15735 - 17090 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC1
Gene ID: MGYG000001451_00013
Location and strand information: 17183 - 18139 (+)
Family: 3.A.1.1.23
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001451_1|CGC1
Gene ID: MGYG000001451_00014
Location and strand information: 18136 - 18999 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC1
Gene ID: MGYG000001451_00015
Location and strand information: 19089 - 20810 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001451_1|CGC1
Gene ID: MGYG000001451_00016
Location and strand information: 20822 - 22171 (+)
Family: 3.A.1.1.44
Protein type: TC
Protein description: hypothetical protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001451_00005	putative formate transporter 1	TC	5065	5949	+	1.A.16.2.3
MGYG000001451_00006	Uroporphyrinogen-III C-methyltransferase	null	5946	6470	+	TP_methylase
MGYG000001451_00007	Uroporphyrinogen-III C-methyltransferase	null	6467	6730	+	No domain
MGYG000001451_00008	hypothetical protein	CAZyme	6851	8242	-	GH18\| CBM5
MGYG000001451_00009	Formate--tetrahydrofolate ligase	null	8595	10226	+	FTHFS
MGYG000001451_00010	hypothetical protein	null	10280	11470	+	Acetyltransf_9\| Acetyltransf_17\| SCP2_2
MGYG000001451_00011	Endo-1,4-beta-xylanase A	CAZyme	11579	15454	-	GH10\| CBM22\| CBM9
MGYG000001451_00012	hypothetical protein	STP	15735	17090	+	SBP_bac_1
MGYG000001451_00013	Lactose transport system permease protein LacF	TC	17183	18139	+	3.A.1.1.23
MGYG000001451_00014	hypothetical protein	TC	18136	18999	+	3.A.1.1.34
MGYG000001451_00015	hypothetical protein	TC	19089	20810	+	8.A.59.2.1
MGYG000001451_00016	hypothetical protein	TC	20822	22171	+	3.A.1.1.44
Protein ID	Protein Name	Type	Start	End	Strand	Signature